IL_9TKR_030

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GU*AUAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TKR_030 not in the Motif Atlas

Homologous match to IL_8B0X_028

Geometric discrepancy: 0.1293

The information below is about IL_8B0X_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73108.5

Basepair signature

cWW-cWS-cSH-cWW

Number of instances in this motif group

26

Unit IDs

9TKR|1|D1|G|597
9TKR|1|D1|U|598
*
9TKR|1|D1|A|640
9TKR|1|D1|U|641
9TKR|1|D1|A|642
9TKR|1|D1|C|643

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AG

Small ribosomal subunit protein uS8

Chain AP

Small ribosomal subunit protein uS17