IL_9TKR_068

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

9TKR|1|D2|A|443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TKR_068 not in the Motif Atlas

Homologous match to IL_8B0X_066

Geometric discrepancy: 0.1041

The information below is about IL_8B0X_066

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

188

Unit IDs

9TKR|1|D2|G|36
9TKR|1|D2|C|37
*
9TKR|1|D2|G|442
9TKR|1|D2|A|443
9TKR|1|D2|C|444

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BD

Large ribosomal subunit protein uL4

Chain BT

Large ribosomal subunit protein bL20