IL_9TKR_155

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACCA

Length

39 nucleotides

Bulged bases

9TKR|1|D2|U|2132, 9TKR|1|D2|G|2133, 9TKR|1|D2|C|2161, 9TKR|1|D2|A|2171, 9TKR|1|D2|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKR|1|D2|U|2122
9TKR|1|D2|G|2123
9TKR|1|D2|G|2124
9TKR|1|D2|G|2125
9TKR|1|D2|A|2126
9TKR|1|D2|G|2127
9TKR|1|D2|G|2128
9TKR|1|D2|C|2129
9TKR|1|D2|U|2130
9TKR|1|D2|U|2131
9TKR|1|D2|U|2132
9TKR|1|D2|G|2133
9TKR|1|D2|A|2134
9TKR|1|D2|A|2135
9TKR|1|D2|G|2136
9TKR|1|D2|U|2137
*
9TKR|1|D2|A|2154
9TKR|1|D2|U|2155
9TKR|1|D2|G|2156
9TKR|1|D2|G|2157
9TKR|1|D2|A|2158
9TKR|1|D2|G|2159
9TKR|1|D2|C|2160
9TKR|1|D2|C|2161
9TKR|1|D2|G|2162
9TKR|1|D2|A|2163
9TKR|1|D2|C|2164
9TKR|1|D2|C|2165
9TKR|1|D2|U|2166
9TKR|1|D2|U|2167
9TKR|1|D2|G|2168
9TKR|1|D2|A|2169
9TKR|1|D2|A|2170
9TKR|1|D2|A|2171
9TKR|1|D2|U|2172
9TKR|1|D2|A|2173
9TKR|1|D2|C|2174
9TKR|1|D2|C|2175
9TKR|1|D2|A|2176

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL1