IL_9TKR_156

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUG*UG

Length

5 nucleotides

Bulged bases

9TKR|1|D2|U|2203

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TKR_156 not in the Motif Atlas

Homologous match to IL_8B0X_146

Geometric discrepancy: 0.0941

The information below is about IL_8B0X_146

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.9

Basepair signature

cWW-L-cWW

Number of instances in this motif group

193

Unit IDs

9TKR|1|D2|U|2202
9TKR|1|D2|U|2203
9TKR|1|D2|G|2204
*
9TKR|1|D2|U|2220
9TKR|1|D2|G|2221

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein bL28

Chain BB

Large ribosomal subunit protein uL2

Chain BI

Large ribosomal subunit protein bL9