IL_9TKR_173

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

9TKR|1|D2|C|2712, 9TKR|1|D2|U|2713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TKR_173 not in the Motif Atlas

Homologous match to IL_8B0X_164

Geometric discrepancy: 0.099

The information below is about IL_8B0X_164

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.5

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

9TKR|1|D2|U|2695
9TKR|1|D2|U|2696
*
9TKR|1|D2|A|2711
9TKR|1|D2|C|2712
9TKR|1|D2|U|2713
9TKR|1|D2|G|2714

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BQ

Large ribosomal subunit protein bL17

Chain BS

Large ribosomal subunit protein bL19