IL_9TMI_078
3D structure
- PDB id
- 9TMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TMI_078 not in the Motif Atlas
- Homologous match to IL_7A0S_011
- Geometric discrepancy: 0.1207
- The information below is about IL_7A0S_011
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01334.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 23
Unit IDs
9TMI|1|a|C|564
9TMI|1|a|C|565
9TMI|1|a|U|566
*
9TMI|1|a|A|575
9TMI|1|a|U|576
9TMI|1|a|G|577
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain e
- Large ribosomal subunit protein uL4
- Chain k
- Large ribosomal subunit protein uL15
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
- Chain z
- Large ribosomal subunit protein bL32
Coloring options: