IL_9TV2_083
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 9TV2|1|L5|A|3649, 9TV2|1|L5|U|3665, 9TV2|1|L5|C|3669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L5|C|3646
9TV2|1|L5|G|3647
9TV2|1|L5|A|3648
9TV2|1|L5|A|3649
9TV2|1|L5|G|3650
9TV2|1|L5|G|3651
*
9TV2|1|L5|U|3663
9TV2|1|L5|G|3664
9TV2|1|L5|U|3665
9TV2|1|L5|U|3666
9TV2|1|L5|G|3667
9TV2|1|L5|A|3668
9TV2|1|L5|C|3669
9TV2|1|L5|G|3670
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain Lp
- 60S ribosomal protein L37a
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