IL_9TV2_127
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- G(PSU)U*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 9TV2|1|L5|G|5034
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L5|G|4985
9TV2|1|L5|PSU|4986
9TV2|1|L5|U|4987
*
9TV2|1|L5|G|5030
9TV2|1|L5|U|5031
9TV2|1|L5|C|5032
9TV2|1|L5|A|5033
9TV2|1|L5|G|5034
9TV2|1|L5|C|5035
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain Ld
- 60S ribosomal protein L31
Coloring options: