IL_9TZ5_029

3D structure

PDB id

9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

GCUAGGGG*CUACCAAAC

Length

17 nucleotides

Bulged bases

9TZ5|1|a|G|887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ5|1|a|G|881
9TZ5|1|a|C|882
9TZ5|1|a|U|883
9TZ5|1|a|A|884
9TZ5|1|a|G|885
9TZ5|1|a|G|886
9TZ5|1|a|G|887
9TZ5|1|a|G|888
*
9TZ5|1|a|C|900
9TZ5|1|a|U|901
9TZ5|1|a|A|902
9TZ5|1|a|C|903
9TZ5|1|a|C|904
9TZ5|1|a|A|905
9TZ5|1|a|A|906
9TZ5|1|a|A|907
9TZ5|1|a|C|908

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain s

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL25