IL_9TZ5_061
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9TZ5|1|a|G|2008
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ5_061 not in the Motif Atlas
- Homologous match to IL_7A0S_062
- Geometric discrepancy: 0.1044
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
9TZ5|1|a|A|1684
9TZ5|1|a|C|1685
9TZ5|1|a|U|1686
9TZ5|1|a|A|1687
9TZ5|1|a|G|1688
9TZ5|1|a|G|1689
*
9TZ5|1|a|C|2006
9TZ5|1|a|U|2007
9TZ5|1|a|G|2008
9TZ5|1|a|U|2009
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL3
- Chain x
- Large ribosomal subunit protein uL14
Coloring options: