IL_9TZ5_075

3D structure

PDB id

9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

9TZ5|1|a|A|1954, 9TZ5|1|a|U|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ5|1|a|C|1950
9TZ5|1|a|G|1951
9TZ5|1|a|A|1952
9TZ5|1|a|A|1953
9TZ5|1|a|A|1954
9TZ5|1|a|U|1955
9TZ5|1|a|U|1956
9TZ5|1|a|C|1957
9TZ5|1|a|C|1958
9TZ5|1|a|U|1959
9TZ5|1|a|U|1960
9TZ5|1|a|G|1961
9TZ5|1|a|U|1962
*
9TZ5|1|a|A|1976
9TZ5|1|a|C|1977
9TZ5|1|a|C|1978
9TZ5|1|a|U|1979
9TZ5|1|a|G|1980

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain o

Large ribosomal subunit protein uL2