IL_9TZ5_105
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- CCUCU*AAG
- Length
- 8 nucleotides
- Bulged bases
- 9TZ5|1|a|A|2742
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ5_105 not in the Motif Atlas
- Homologous match to IL_7A0S_095
- Geometric discrepancy: 0.1441
- The information below is about IL_7A0S_095
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.13
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 23
Unit IDs
9TZ5|1|a|C|2696
9TZ5|1|a|C|2697
9TZ5|1|a|U|2698
9TZ5|1|a|C|2699
9TZ5|1|a|U|2700
*
9TZ5|1|a|A|2741
9TZ5|1|a|A|2742
9TZ5|1|a|G|2743
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- Large ribosomal subunit protein bL19
- Chain d
- Large ribosomal subunit protein uL3
- Chain m
- Large ribosomal subunit protein bL17
- Chain x
- Large ribosomal subunit protein uL14
Coloring options: