IL_9TZ5_112
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UGGAAG*UGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ5_112 not in the Motif Atlas
- Homologous match to IL_7A0S_101
- Geometric discrepancy: 0.3521
- The information below is about IL_7A0S_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9TZ5|1|a|U|2862
9TZ5|1|a|G|2863
9TZ5|1|a|G|2864
9TZ5|1|a|A|2865
9TZ5|1|a|A|2866
9TZ5|1|a|G|2867
*
9TZ5|1|a|U|2880
9TZ5|1|a|G|2881
9TZ5|1|a|A|2882
9TZ5|1|a|A|2883
9TZ5|1|a|G|2884
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- Large ribosomal subunit protein bL19
- Chain m
- Large ribosomal subunit protein bL17
Coloring options: