IL_9TZ9_049

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CUAG*UGAUG

Length

9 nucleotides

Bulged bases

9TZ9|1|a|U|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TZ9_049 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.2097

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9TZ9|1|a|C|1447
9TZ9|1|a|U|1448
9TZ9|1|a|A|1449
9TZ9|1|a|G|1450
*
9TZ9|1|a|U|1566
9TZ9|1|a|G|1567
9TZ9|1|a|A|1568
9TZ9|1|a|U|1569
9TZ9|1|a|G|1570

Current chains

Chain a

23S ribosomal RNA

Nearby chains