IL_9TZ9_104
3D structure
- PDB id
- 9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Empty 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ9_104 not in the Motif Atlas
- Homologous match to IL_7A0S_094
- Geometric discrepancy: 0.0764
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9TZ9|1|a|C|2668
9TZ9|1|a|U|2669
9TZ9|1|a|A|2670
9TZ9|1|a|G|2671
9TZ9|1|a|U|2672
9TZ9|1|a|A|2673
9TZ9|1|a|C|2674
*
9TZ9|1|a|G|2679
9TZ9|1|a|G|2680
9TZ9|1|a|A|2681
9TZ9|1|a|C|2682
9TZ9|1|a|C|2683
9TZ9|1|a|G|2684
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain g
- Large ribosomal subunit protein uL6
Coloring options: