IL_9TZE_039
3D structure
- PDB id
- 9TZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZE_039 not in the Motif Atlas
- Homologous match to IL_6CZR_145
- Geometric discrepancy: 0.1148
- The information below is about IL_6CZR_145
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9TZE|1|A|C|776
9TZE|1|A|A|777
9TZE|1|A|A|778
9TZE|1|A|A|779
9TZE|1|A|C|780
*
9TZE|1|A|G|796
9TZE|1|A|G|797
9TZE|1|A|U|798
9TZE|1|A|A|799
9TZE|1|A|G|800
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain U
- Small ribosomal subunit protein bS21
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain o
- Large ribosomal subunit protein uL2
Coloring options: