IL_9TZE_104
3D structure
- PDB id
- 9TZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- UUAAGUG*CUCAAA
- Length
- 13 nucleotides
- Bulged bases
- 9TZE|1|a|C|1148, 9TZE|1|a|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZE_104 not in the Motif Atlas
- Homologous match to IL_7A0S_036
- Geometric discrepancy: 0.5844
- The information below is about IL_7A0S_036
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
9TZE|1|a|U|1024
9TZE|1|a|U|1025
9TZE|1|a|A|1026
9TZE|1|a|A|1027
9TZE|1|a|G|1028
9TZE|1|a|U|1029
9TZE|1|a|G|1030
*
9TZE|1|a|C|1146
9TZE|1|a|U|1147
9TZE|1|a|C|1148
9TZE|1|a|A|1149
9TZE|1|a|A|1150
9TZE|1|a|A|1151
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36
- Chain g
- Large ribosomal subunit protein uL6
- Chain i
- Large ribosomal subunit protein uL13
Coloring options: