IL_9TZE_111
3D structure
- PDB id
- 9TZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- AUAAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZE_111 not in the Motif Atlas
- Homologous match to IL_7A0S_045
- Geometric discrepancy: 0.1189
- The information below is about IL_7A0S_045
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9TZE|1|a|A|1272
9TZE|1|a|U|1273
9TZE|1|a|A|1274
9TZE|1|a|A|1275
9TZE|1|a|G|1276
9TZE|1|a|U|1277
9TZE|1|a|A|1278
9TZE|1|a|A|1279
*
9TZE|1|a|U|2027
9TZE|1|a|G|2028
9TZE|1|a|A|2029
9TZE|1|a|A|2030
9TZE|1|a|A|2031
9TZE|1|a|U|2032
9TZE|1|a|U|2033
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain j
- Large ribosomal subunit protein uL22
- Chain v
- Large ribosomal subunit protein bL32
- Chain w
- Large ribosomal subunit protein uL4
Coloring options: