IL_9TZE_123

3D structure

PDB id

9TZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Coxiella burnetii Ribosome with Doxycycline and HPFcold

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

AG*CAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TZE_123 not in the Motif Atlas

Geometric match to IL_8B0X_120

Geometric discrepancy: 0.2811

The information below is about IL_8B0X_120

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52564.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9TZE|1|a|A|1491
9TZE|1|a|G|1492
*
9TZE|1|a|C|1517
9TZE|1|a|A|1518
9TZE|1|a|A|1519
9TZE|1|a|U|1520

Current chains

Chain a

23S ribosomal RNA

Nearby chains