IL_9UWH_004

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_004 not in the Motif Atlas

Homologous match to IL_7A0S_011

Geometric discrepancy: 0.1413

The information below is about IL_7A0S_011

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

9UWH|1|A|C|1845
9UWH|1|A|C|1846
9UWH|1|A|U|1847
*
9UWH|1|A|A|1856
9UWH|1|A|U|1857
9UWH|1|A|G|1858

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL32m

Chain M

Large ribosomal subunit protein uL15m

Chain R

Large ribosomal subunit protein bL20m

Chain S

Large ribosomal subunit protein bL21m