IL_9UWH_008
3D structure
- PDB id
- 9UWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosome trapped by retapamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAAC*GUGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9UWH|1|A|G|2011, 9UWH|1|A|G|2015
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9UWH_008 not in the Motif Atlas
- Homologous match to IL_7A0S_015
- Geometric discrepancy: 0.1677
- The information below is about IL_7A0S_015
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9UWH|1|A|G|1906
9UWH|1|A|A|1907
9UWH|1|A|A|1908
9UWH|1|A|A|1909
9UWH|1|A|C|1910
*
9UWH|1|A|G|2009
9UWH|1|A|U|2010
9UWH|1|A|G|2011
9UWH|1|A|A|2012
9UWH|1|A|U|2013
9UWH|1|A|A|2014
9UWH|1|A|G|2015
9UWH|1|A|C|2016
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain F
- Large ribosomal subunit protein uL4m
- Chain M
- Large ribosomal subunit protein uL15m
- Chain d
- Large ribosomal subunit protein mL45
- Chain i
- Large ribosomal subunit protein mL51
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