IL_9UWH_019

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAG*CACC

Length

8 nucleotides

Bulged bases

9UWH|1|A|A|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_019 not in the Motif Atlas

Homologous match to IL_1MMS_003

Geometric discrepancy: 0.1146

The information below is about IL_1MMS_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

9UWH|1|A|G|2170
9UWH|1|A|U|2171
9UWH|1|A|A|2172
9UWH|1|A|G|2173
*
9UWH|1|A|C|2187
9UWH|1|A|A|2188
9UWH|1|A|C|2189
9UWH|1|A|C|2190

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain J

Large ribosomal subunit protein uL11m

Chain N

Large ribosomal subunit protein uL16m

Chain l

Large ribosomal subunit protein mL54