IL_9UWH_034

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

9UWH|1|A|U|2628, 9UWH|1|A|A|2629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_034 not in the Motif Atlas

Geometric match to IL_8ZAU_001

Geometric discrepancy: 0.15

The information below is about IL_8ZAU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05670.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

9UWH|1|A|G|2596
9UWH|1|A|C|2597
*
9UWH|1|A|G|2627
9UWH|1|A|U|2628
9UWH|1|A|A|2629
9UWH|1|A|U|2630

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein mS38

Chain Ax

P/P-tRNA