IL_9UWH_059

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAG*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_059 not in the Motif Atlas

Geometric match to IL_5E81_401

Geometric discrepancy: 0.2847

The information below is about IL_5E81_401

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

9UWH|1|AA|U|674
9UWH|1|AA|A|675
9UWH|1|AA|G|676
*
9UWH|1|AA|U|921
9UWH|1|AA|C|922
9UWH|1|AA|A|923

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

Small ribosomal subunit protein uS12m

Chain AO

Small ribosomal subunit protein mS40