IL_9UWH_094

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_094 not in the Motif Atlas

Homologous match to IL_6CZR_157

Geometric discrepancy: 0.2362

The information below is about IL_6CZR_157

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_08069.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

9UWH|1|AA|A|1266
9UWH|1|AA|U|1267
9UWH|1|AA|C|1268
*
9UWH|1|AA|G|1323
9UWH|1|AA|U|1324
9UWH|1|AA|U|1325

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AC

Small ribosomal subunit protein uS3m

Chain AD

Small ribosomal subunit protein uS5m

Chain AH

Small ribosomal subunit protein uS10m

Chain Az

mRNA