IL_9UWH_095
3D structure
- PDB id
- 9UWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosome trapped by retapamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAA*UAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9UWH_095 not in the Motif Atlas
- Geometric match to IL_8CRE_402
- Geometric discrepancy: 0.1387
- The information below is about IL_8CRE_402
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
9UWH|1|AA|C|1274
9UWH|1|AA|A|1275
9UWH|1|AA|A|1276
9UWH|1|AA|A|1277
*
9UWH|1|AA|U|1298
9UWH|1|AA|A|1299
9UWH|1|AA|A|1300
9UWH|1|AA|G|1301
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A1
- Small ribosomal subunit protein mS35
- Chain AB
- Small ribosomal subunit protein uS2m
- Chain AC
- Small ribosomal subunit protein uS3m
- Chain AD
- Small ribosomal subunit protein uS5m
- Chain AG
- Small ribosomal subunit protein uS9m
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