IL_9UWH_108

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUG*CUUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9UWH_108 not in the Motif Atlas

Geometric match to IL_8P9A_355

Geometric discrepancy: 0.1445

The information below is about IL_8P9A_355

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

9UWH|1|Ax|G|49
9UWH|1|Ax|U|50
9UWH|1|Ax|U|51
9UWH|1|Ax|G|52
*
9UWH|1|Ax|C|62
9UWH|1|Ax|U|63
9UWH|1|Ax|U|64
9UWH|1|Ax|C|65

Current chains

Chain Ax

P/P-tRNA

Nearby chains

Chain 8

Large ribosomal subunit protein mL40

Chain N

Large ribosomal subunit protein uL16m

Chain W

Large ribosomal subunit protein bL27m