IL_9UZK_078
3D structure
- PDB id
- 9UZK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EMCV IRES captured on mammalian 40S with initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 9UZK|1|2|U|1580, 9UZK|1|2|G|1582
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9UZK|1|2|G|1536
9UZK|1|2|C|1537
9UZK|1|2|U|1538
9UZK|1|2|C|1539
9UZK|1|2|A|1540
9UZK|1|2|G|1541
9UZK|1|2|C|1542
9UZK|1|2|G|1543
9UZK|1|2|U|1544
9UZK|1|2|G|1545
*
9UZK|1|2|C|1577
9UZK|1|2|C|1578
9UZK|1|2|G|1579
9UZK|1|2|U|1580
9UZK|1|2|U|1581
9UZK|1|2|G|1582
9UZK|1|2|A|1583
9UZK|1|2|A|1584
9UZK|1|2|C|1585
9UZK|1|2|C|1586
9UZK|1|2|C|1587
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein uS3
- Chain H
- Small ribosomal subunit protein uS7
- Chain S
- Small ribosomal subunit protein uS9
- Chain V
- Small ribosomal subunit protein eS19
- Chain W
- Small ribosomal subunit protein uS10
- Chain e
- Small ribosomal subunit protein uS14
- Chain h
- Small ribosomal subunit protein eS25
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