RNA 3D Hub //

9UZK Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9UZK_0011/2/7:17No text annotation
HL_9UZK_0091/2/431:442No text annotation
HL_9UZK_0151/2/816:824No text annotation
HL_9UZK_0201/2/1050:1060No text annotation
HL_9UZK_0241/2/1241:1250No text annotation
HL_9UZK_0261/2/1349:1354No text annotation
HL_9UZK_0271/2/1362:1369No text annotation
HL_9UZK_0291/2/1456:1462No text annotation
HL_9UZK_0321/2/1653:1661No text annotation

Problematic loops

#loop idProblemSequence
HL_9UZK_002No text annotation
HL_9UZK_003No text annotation
HL_9UZK_004No text annotation
HL_9UZK_005No text annotation
HL_9UZK_006No text annotation
HL_9UZK_007No text annotation
HL_9UZK_008No text annotation
HL_9UZK_010No text annotation
HL_9UZK_011No text annotation
HL_9UZK_012No text annotation
HL_9UZK_013No text annotation
HL_9UZK_014No text annotation
HL_9UZK_016No text annotation
HL_9UZK_017No text annotation
HL_9UZK_018No text annotation
HL_9UZK_019No text annotation
HL_9UZK_021No text annotation
HL_9UZK_022No text annotation
HL_9UZK_023No text annotation
HL_9UZK_025No text annotation
HL_9UZK_028No text annotation
HL_9UZK_030No text annotation
HL_9UZK_031No text annotation
HL_9UZK_033No text annotation
HL_9UZK_034No text annotation
HL_9UZK_035tRNA anticodon loop
HL_9UZK_036No text annotation
HL_9UZK_037GNRA
HL_9UZK_038No text annotation
HL_9UZK_039No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9UZK_0031/2/37:40,
1/2/504:508		No text annotation
IL_9UZK_0041/2/41:47,
1/2/469:471		No text annotation
IL_9UZK_0081/2/108:112,
1/2/339:343		No text annotation
IL_9UZK_0091/2/112:115,
1/2/338:339		No text annotation
IL_9UZK_0151/2/213:216,
1/2/293:300		No text annotation
IL_9UZK_0181/2/349:354,
1/2/386:393		No text annotation
IL_9UZK_0191/2/356:361,
1/2/383:384		No text annotation
IL_9UZK_0201/2/401:403,
1/2/414:419		No text annotation
IL_9UZK_0291/2/553:555,
1/2/575:582		No text annotation
IL_9UZK_0311/2/589:596,
1/2/626:627		No text annotation
IL_9UZK_0331/2/601:607,
1/2/614:622		No text annotation
IL_9UZK_0351/2/663:665,
1/2/1026:1028		No text annotation
IL_9UZK_0361/2/666:671,
1/2/1020:1025		No text annotation
IL_9UZK_0391/2/801:803,
1/2/852:854		No text annotation
IL_9UZK_0401/2/803:812,
1/2/844:852		No text annotation
IL_9UZK_0461/2/927:931,
1/2/1003:1006		No text annotation
IL_9UZK_0481/2/948:952,
1/2/963:970		No text annotation
IL_9UZK_0491/2/1038:1043,
1/2/1067:1069		No text annotation
IL_9UZK_0511/2/1087:1089,
1/2/1148:1154		No text annotation
IL_9UZK_0521/2/1094:1097,
1/2/1127:1130		No text annotation
IL_9UZK_0551/2/1164:1171,
1/2/1182:1187		No text annotation
IL_9UZK_0561/2/1199:1200,
1/2/1689:1691		No text annotation
IL_9UZK_0571/2/1202:1204,
1/2/1686:1687		No text annotation
IL_9UZK_0601/2/1231:1232,
1/2/1516:1518		No text annotation
IL_9UZK_0661/2/1321:1323,
1/2/1498:1499		No text annotation
IL_9UZK_0681/2/1333:1334,
1/2/1484:1486		No text annotation
IL_9UZK_0691/2/1343:1345,
1/2/1376:1378		No text annotation
IL_9UZK_0701/2/1359:1361,
1/2/1370:1371		No text annotation
IL_9UZK_0761/2/1449:1452,
1/2/1466:1471		No text annotation
IL_9UZK_0781/2/1536:1545,
1/2/1577:1587		No text annotation
IL_9UZK_0791/2/1545:1553,
1/2/1572:1577		No text annotation
IL_9UZK_0821/2/1695:1697,
1/2/1827:1830		No text annotation
IL_9UZK_0861/2/1709:1711,
1/2/1811:1813		No text annotation

Problematic loops

#loop idProblemSequence
IL_9UZK_001No text annotation
IL_9UZK_002No text annotation
IL_9UZK_005No text annotation
IL_9UZK_006No text annotation
IL_9UZK_007No text annotation
IL_9UZK_010No text annotation
IL_9UZK_011No text annotation
IL_9UZK_012No text annotation
IL_9UZK_013No text annotation
IL_9UZK_014No text annotation
IL_9UZK_016No text annotation
IL_9UZK_017No text annotation
IL_9UZK_021No text annotation
IL_9UZK_022No text annotation
IL_9UZK_023No text annotation
IL_9UZK_024No text annotation
IL_9UZK_025No text annotation
IL_9UZK_026No text annotation
IL_9UZK_027No text annotation
IL_9UZK_028No text annotation
IL_9UZK_030No text annotation
IL_9UZK_032No text annotation
IL_9UZK_034No text annotation
IL_9UZK_037No text annotation
IL_9UZK_038No text annotation
IL_9UZK_041No text annotation
IL_9UZK_042No text annotation
IL_9UZK_043No text annotation
IL_9UZK_044No text annotation
IL_9UZK_045No text annotation
IL_9UZK_047No text annotation
IL_9UZK_050No text annotation
IL_9UZK_053No text annotation
IL_9UZK_054No text annotation
IL_9UZK_058No text annotation
IL_9UZK_059No text annotation
IL_9UZK_061No text annotation
IL_9UZK_062No text annotation
IL_9UZK_063No text annotation
IL_9UZK_064No text annotation
IL_9UZK_065No text annotation
IL_9UZK_067No text annotation
IL_9UZK_071No text annotation
IL_9UZK_072No text annotation
IL_9UZK_073No text annotation
IL_9UZK_074No text annotation
IL_9UZK_075No text annotation
IL_9UZK_077No text annotation
IL_9UZK_080No text annotation
IL_9UZK_081No text annotation
IL_9UZK_083No text annotation
IL_9UZK_084No text annotation
IL_9UZK_085No text annotation
IL_9UZK_087No text annotation
IL_9UZK_088No text annotation
IL_9UZK_089No text annotation
IL_9UZK_090No text annotation
IL_9UZK_091No text annotation
IL_9UZK_092No text annotation
IL_9UZK_093No text annotation
IL_9UZK_094No text annotation
IL_9UZK_095No text annotation
IL_9UZK_096No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9UZK_0031/2/672:675,
1/2/913:918,
1/2/1018:1019		No text annotation
J3_9UZK_0041/2/672:675,
1/2/913:919,
1/2/1015:1019		No text annotation
J3_9UZK_0061/2/934:937,
1/2/981:989,
1/2/996:1000		No text annotation
J3_9UZK_0071/2/1090:1092,
1/2/1132:1136,
1/2/1143:1147		No text annotation
J3_9UZK_0081/2/1214:1217,
1/2/1640:1646,
1/2/1668:1675		No text annotation
J3_9UZK_0101/2/1233:1241,
1/2/1250:1262,
1/2/1511:1515		No text annotation
J3_9UZK_0121/2/1336:1341,
1/2/1380:1385,
1/2/1477:1482		No text annotation
J3_9UZK_0131/2/1346:1347,
1/2/1356:1359,
1/2/1371:1375		No text annotation
J3_9UZK_0141/2/1387:1391,
1/2/1446:1449,
1/2/1471:1475		No text annotation
J3_9UZK_0151/2/1387:1391,
1/2/1446:1452,
1/2/1466:1475		No text annotation
J3_9UZK_0161/2/1527:1531,
1/2/1592:1599,
1/2/1630:1633		No text annotation
J4_9UZK_0011/2/98:106,
1/2/345:347,
1/2/395:399,
1/2/421:422		No text annotation
J4_9UZK_0021/2/655:663,
1/2/1028:1033,
1/2/1074:1085,
1/2/1156:1158		No text annotation
J5_9UZK_0011/2/30:34,
1/2/511:517,
1/2/548:553,
1/2/582:585,
1/2/631:634		No text annotation
J5_9UZK_0021/2/30:34,
1/2/511:517,
1/2/548:555,
1/2/575:585,
1/2/631:634		No text annotation
J5_9UZK_0031/2/53:56,
1/2/89:96,
1/2/424:426,
1/2/447:449,
1/2/460:464		No text annotation

Problematic loops

#loop idProblemSequence
J3_9UZK_001No text annotation
J3_9UZK_002No text annotation
J3_9UZK_005No text annotation
J3_9UZK_009No text annotation
J3_9UZK_011No text annotation
J4_9UZK_003No text annotation
J4_9UZK_004No text annotation

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