IL_9UZM_040

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|G|803
9UZM|1|2|A|804
9UZM|1|2|A|805
9UZM|1|2|A|806
9UZM|1|2|A|807
9UZM|1|2|A|808
9UZM|1|2|A|809
9UZM|1|2|U|810
9UZM|1|2|U|811
*
9UZM|1|2|A|845
9UZM|1|2|C|846
9UZM|1|2|C|847
9UZM|1|2|G|848
9UZM|1|2|C|849
9UZM|1|2|A|850
9UZM|1|2|G|851
9UZM|1|2|C|852

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

Small ribosomal subunit protein eS4

Chain L

Small ribosomal subunit protein uS4

Chain N

Small ribosomal subunit protein uS17

Chain Y

Small ribosomal subunit protein uS8