IL_9VTH_001
3D structure
- PDB id
- 9VTH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUGGAUCGCG*CA
- Length
- 12 nucleotides
- Bulged bases
- 9VTH|1|10|U|107, 9VTH|1|10|G|108, 9VTH|1|10|G|109
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VTH|1|10|U|106
9VTH|1|10|U|107
9VTH|1|10|G|108
9VTH|1|10|G|109
9VTH|1|10|A|110
9VTH|1|10|U|111
9VTH|1|10|C|112
9VTH|1|10|G|113
9VTH|1|10|C|114
9VTH|1|10|G|115
*
9VTH|1|10|C|148
9VTH|1|10|A|149
Current chains
- Chain 10
- RNA (204-MER)
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: