IL_9VTH_002

3D structure

PDB id

9VTH (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUCAAAU*AUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9VTH|1|10|G|118
9VTH|1|10|G|119
9VTH|1|10|U|120
9VTH|1|10|C|121
9VTH|1|10|A|122
9VTH|1|10|A|123
9VTH|1|10|A|124
9VTH|1|10|U|125
*
9VTH|1|10|A|143
9VTH|1|10|U|144
9VTH|1|10|C|145

Current chains

Chain 10

RNA (204-MER)

Nearby chains

Chain SE

40S ribosomal protein S5