IL_9VTH_043
3D structure
- PDB id
- 9VTH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGG*UCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9VTH_043 not in the Motif Atlas
- Homologous match to IL_9H3G_195
- Geometric discrepancy: 0.1408
- The information below is about IL_9H3G_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VTH|1|11|C|825
9VTH|1|11|G|826
9VTH|1|11|G|827
*
9VTH|1|11|U|851
9VTH|1|11|C|852
9VTH|1|11|G|853
Current chains
- Chain 11
- 18S rRNA
Nearby chains
- Chain LW
- Ribosomal protein L19
- Chain SN
- 40S ribosomal protein S11
Coloring options: