IL_9VTH_075

3D structure

PDB id

9VTH (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UAU*GGCCA

Length

8 nucleotides

Bulged bases

9VTH|1|11|C|1377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9VTH|1|11|U|1354
9VTH|1|11|A|1355
9VTH|1|11|U|1356
*
9VTH|1|11|G|1375
9VTH|1|11|G|1376
9VTH|1|11|C|1377
9VTH|1|11|C|1378
9VTH|1|11|A|1379

Current chains

Chain 11

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S16

Chain SH

40S ribosomal protein S20-2