IL_9VTH_113
3D structure
- PDB id
- 9VTH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAG*CACCACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9VTH_113 not in the Motif Atlas
- Homologous match to IL_9H3G_014
- Geometric discrepancy: 0.0973
- The information below is about IL_9H3G_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VTH|1|14|C|166
9VTH|1|14|A|167
9VTH|1|14|G|168
*
9VTH|1|14|C|244
9VTH|1|14|A|245
9VTH|1|14|C|246
9VTH|1|14|C|247
9VTH|1|14|A|248
9VTH|1|14|C|249
9VTH|1|14|G|250
Current chains
- Chain 14
- 25S rRNA
Nearby chains
- Chain LO
- 60S ribosomal protein L35-like
- Chain LS
- 60S ribosomal protein L13
Coloring options: