IL_9VTH_125
3D structure
- PDB id
- 9VTH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAACG*CGUAAG
- Length
- 11 nucleotides
- Bulged bases
- 9VTH|1|14|A|693, 9VTH|1|14|A|711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VTH|1|14|C|691
9VTH|1|14|A|692
9VTH|1|14|A|693
9VTH|1|14|C|694
9VTH|1|14|G|695
*
9VTH|1|14|C|708
9VTH|1|14|G|709
9VTH|1|14|U|710
9VTH|1|14|A|711
9VTH|1|14|A|712
9VTH|1|14|G|713
Current chains
- Chain 14
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L4-like
- Chain LI
- 60s ribosomal protein l27a-3
- Chain LS
- 60S ribosomal protein L13
- Chain LU
- Ribosomal protein L15
- Chain LV
- 60S ribosomal protein L18-2
Coloring options: