IL_9VTH_205

3D structure

PDB id

9VTH (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUGUAGUAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9VTH|1|14|G|2454
9VTH|1|14|G|2455
9VTH|1|14|U|2456
9VTH|1|14|G|2457
9VTH|1|14|U|2458
9VTH|1|14|A|2459
9VTH|1|14|G|2460
9VTH|1|14|U|2461
9VTH|1|14|A|2462
9VTH|1|14|U|2463
9VTH|1|14|A|2464
9VTH|1|14|A|2465
*
9VTH|1|14|U|2498
9VTH|1|14|A|2499
9VTH|1|14|C|2500

Current chains

Chain 14

25S rRNA

Nearby chains

Chain 10

RNA (204-MER)

Chain LA

Ribosomal protein