IL_9VXN_112
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- (PSU)CA(A2M)AGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|L5|PSU|3715
9VXN|1|L5|C|3716
9VXN|1|L5|A|3717
9VXN|1|L5|A2M|3718
9VXN|1|L5|A|3719
9VXN|1|L5|G|3720
9VXN|1|L5|U|3721
*
9VXN|1|L5|A|3732
9VXN|1|L5|A|3733
9VXN|1|L5|U|3734
9VXN|1|L5|G|3735
9VXN|1|L5|A|3736
9VXN|1|L5|A|3737
9VXN|1|L5|G|3738
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- Large ribosomal subunit protein uL2
- Chain Li
- Large ribosomal subunit protein eL36
- Chain Lo
- Large ribosomal subunit protein eL42
- Chain v
- Transfer RNA; tRNA
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