IL_9VXN_218
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- GCUAG*CUUGGACC
- Length
- 13 nucleotides
- Bulged bases
- 9VXN|1|S2|G|970
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|S2|G|952
9VXN|1|S2|C|953
9VXN|1|S2|U|954
9VXN|1|S2|A|955
9VXN|1|S2|G|956
*
9VXN|1|S2|C|967
9VXN|1|S2|U|968
9VXN|1|S2|U|969
9VXN|1|S2|G|970
9VXN|1|S2|G|971
9VXN|1|S2|A|972
9VXN|1|S2|C|973
9VXN|1|S2|C|974
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SB
- Small ribosomal subunit protein eS1
- Chain SO
- Small ribosomal subunit protein uS11
Coloring options: