IL_9W0N_012
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_012 not in the Motif Atlas
- Homologous match to IL_8B0X_076
- Geometric discrepancy: 0.1371
- The information below is about IL_8B0X_076
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9W0N|1|1|G|536
9W0N|1|1|G|537
9W0N|1|1|A|538
9W0N|1|1|G|539
*
9W0N|1|1|U|554
9W0N|1|1|G|555
9W0N|1|1|A|556
9W0N|1|1|C|557
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain j
- Large ribosomal subunit protein uL13
- Chain q
- Large ribosomal subunit protein bL20
Coloring options: