IL_9W0N_029
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCAAG*CAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_029 not in the Motif Atlas
- Homologous match to IL_8B0X_094
- Geometric discrepancy: 0.1869
- The information below is about IL_8B0X_094
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9W0N|1|1|G|875
9W0N|1|1|C|876
9W0N|1|1|A|877
9W0N|1|1|A|878
9W0N|1|1|G|879
*
9W0N|1|1|C|898
9W0N|1|1|A|899
9W0N|1|1|A|900
9W0N|1|1|C|901
9W0N|1|1|C|902
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain m
- Large ribosomal subunit protein uL16
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