IL_9W0N_109
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 9W0N|1|3|C|48, 9W0N|1|3|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_109 not in the Motif Atlas
- Geometric match to IL_8B0X_003
- Geometric discrepancy: 0.1492
- The information below is about IL_8B0X_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9W0N|1|3|C|47
9W0N|1|3|C|48
9W0N|1|3|U|49
9W0N|1|3|A|50
9W0N|1|3|A|51
9W0N|1|3|C|52
*
9W0N|1|3|G|359
9W0N|1|3|G|360
9W0N|1|3|G|361
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 0
- Elongation factor G
- Chain Q
- Small ribosomal subunit protein uS12
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