IL_9W0N_128
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAGG*CGUUAC
- Length
- 11 nucleotides
- Bulged bases
- 9W0N|1|3|U|485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_128 not in the Motif Atlas
- Homologous match to IL_8B0X_021
- Geometric discrepancy: 0.2596
- The information below is about IL_8B0X_021
- Detailed Annotation
- tWW-tWH-tHS
- Broad Annotation
- tWW-tWH-tHS
- Motif group
- IL_82100.1
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9W0N|1|3|G|446
9W0N|1|3|G|447
9W0N|1|3|A|448
9W0N|1|3|G|449
9W0N|1|3|G|450
*
9W0N|1|3|C|483
9W0N|1|3|G|484
9W0N|1|3|U|485
9W0N|1|3|U|486
9W0N|1|3|A|487
9W0N|1|3|C|488
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain I
- Small ribosomal subunit protein uS4
- Chain U
- Small ribosomal subunit protein bS16
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