IL_9W0N_136
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 9W0N|1|3|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_136 not in the Motif Atlas
- Homologous match to IL_8B0X_029
- Geometric discrepancy: 0.1226
- The information below is about IL_8B0X_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9W0N|1|3|U|605
9W0N|1|3|G|606
9W0N|1|3|A|607
9W0N|1|3|A|608
9W0N|1|3|A|609
9W0N|1|3|U|610
9W0N|1|3|C|611
9W0N|1|3|C|612
*
9W0N|1|3|G|628
9W0N|1|3|A|629
9W0N|1|3|A|630
9W0N|1|3|C|631
9W0N|1|3|U|632
9W0N|1|3|G|633
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain I
- Small ribosomal subunit protein uS4
- Chain M
- Small ribosomal subunit protein uS8
- Chain U
- Small ribosomal subunit protein bS16
- Chain V
- Small ribosomal subunit protein uS17
Coloring options: