IL_9W0N_139
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 9W0N|1|3|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_139 not in the Motif Atlas
- Homologous match to IL_8B0X_032
- Geometric discrepancy: 0.0924
- The information below is about IL_8B0X_032
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9W0N|1|3|U|662
9W0N|1|3|A|663
9W0N|1|3|G|664
9W0N|1|3|A|665
9W0N|1|3|G|666
*
9W0N|1|3|U|740
9W0N|1|3|G|741
9W0N|1|3|G|742
9W0N|1|3|A|743
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein bS6, fully modified isoform
- Chain T
- Small ribosomal subunit protein uS15
- Chain W
- Small ribosomal subunit protein bS18
Coloring options: