IL_9W0N_143
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_143 not in the Motif Atlas
- Homologous match to IL_8B0X_036
- Geometric discrepancy: 0.0824
- The information below is about IL_8B0X_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9W0N|1|3|C|779
9W0N|1|3|A|780
9W0N|1|3|A|781
9W0N|1|3|A|782
9W0N|1|3|C|783
*
9W0N|1|3|G|799
9W0N|1|3|G|800
9W0N|1|3|U|801
9W0N|1|3|A|802
9W0N|1|3|G|803
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- Small ribosomal subunit protein uS11
- Chain Z
- Small ribosomal subunit protein bS21
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