IL_9W0N_161
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAG*CGGACC
- Length
- 10 nucleotides
- Bulged bases
- 9W0N|1|3|A|1257, 9W0N|1|3|G|1278, 9W0N|1|3|A|1280, 9W0N|1|3|C|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_161 not in the Motif Atlas
- Homologous match to IL_8B0X_054
- Geometric discrepancy: 0.303
- The information below is about IL_8B0X_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9W0N|1|3|G|1255
9W0N|1|3|A|1256
9W0N|1|3|A|1257
9W0N|1|3|G|1258
*
9W0N|1|3|C|1277
9W0N|1|3|G|1278
9W0N|1|3|G|1279
9W0N|1|3|A|1280
9W0N|1|3|C|1281
9W0N|1|3|C|1282
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 7
- Transcription termination/antitermination protein NusG
- Chain H
- Small ribosomal subunit protein uS3
- Chain O
- Small ribosomal subunit protein uS10
- Chain S
- Small ribosomal subunit protein uS14
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