IL_9W0N_162
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_162 not in the Motif Atlas
- Homologous match to IL_8B0X_055
- Geometric discrepancy: 0.1752
- The information below is about IL_8B0X_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9W0N|1|3|C|1259
9W0N|1|3|G|1260
9W0N|1|3|A|1261
9W0N|1|3|C|1262
9W0N|1|3|C|1263
*
9W0N|1|3|G|1272
9W0N|1|3|C|1273
9W0N|1|3|A|1274
9W0N|1|3|A|1275
9W0N|1|3|G|1276
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 7
- Transcription termination/antitermination protein NusG
- Chain S
- Small ribosomal subunit protein uS14
- Chain X
- Small ribosomal subunit protein uS19
Coloring options: