IL_9WNQ_108

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CCCAGACAGCC*GUCGAG

Length

17 nucleotides

Bulged bases

9WNQ|1|b|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNQ|1|b|C|1043
9WNQ|1|b|C|1044
9WNQ|1|b|C|1045
9WNQ|1|b|A|1046
9WNQ|1|b|G|1047
9WNQ|1|b|A|1048
9WNQ|1|b|C|1049
9WNQ|1|b|A|1050
9WNQ|1|b|G|1051
9WNQ|1|b|C|1052
9WNQ|1|b|C|1053
*
9WNQ|1|b|G|1107
9WNQ|1|b|U|1108
9WNQ|1|b|C|1109
9WNQ|1|b|G|1110
9WNQ|1|b|A|1111
9WNQ|1|b|G|1112

Current chains

Chain b

23S ribosomal RNA

Nearby chains

Chain g

Large ribosomal subunit protein uL6