IL_9WNQ_145

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9WNQ_145 not in the Motif Atlas

Geometric match to IL_8B0X_136

Geometric discrepancy: 0.1666

The information below is about IL_8B0X_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77691.7

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

9WNQ|1|b|U|1864
9WNQ|1|b|U|1865
9WNQ|1|b|A|1866
9WNQ|1|b|G|1867
*
9WNQ|1|b|C|1874
9WNQ|1|b|G|1875
9WNQ|1|b|A|1876
9WNQ|1|b|A|1877
9WNQ|1|b|G|1878

Current chains

Chain b

23S ribosomal RNA

Nearby chains